Index A | B | C | D | E | F | G | I | L | M | N | P | R | S | T | U A add_cable_type() (arborize.definitions.Definition method) add_ion() (arborize.CableType method) (arborize.definitions.CableType method) add_mech() (arborize.CableType method) (arborize.definitions.CableType method) add_synapse() (arborize.CableType method) (arborize.definitions.CableType method) add_synapse_type() (arborize.definitions.Definition method) anchor() (arborize.CableType class method) (arborize.definitions.CableType class method) append() (arborize.schematic.CableBranch method) (arborize.schematic.UnitBranch method) arbor (arborize.Schematic attribute) (arborize.schematic.Schematic attribute) arbor_build() (in module arborize) arborize module arborize.builders module arborize.definitions module arborize.exceptions module arborize.parameter module arborize.schematic module arborize.schematics module arborize.synapse module ArborizeError assert_() (arborize.CableType method) (arborize.definitions.CableType method) B bluepyopt_build() (in module arborize) Branch (class in arborize.schematic) bsb_schematic() (in module arborize) C cable (arborize.CableType attribute) (arborize.definitions.CableType attribute) (arborize.definitions.CableTypeDict attribute) cable_properties_class (arborize.definitions.Definition property) (arborize.definitions.ModelDefinition attribute) (arborize.ModelDefinition attribute) cable_type_class (arborize.definitions.Definition property) (arborize.definitions.ModelDefinition attribute) (arborize.ModelDefinition attribute) cable_types (arborize.definitions.ModelDefinitionDict attribute) CableBranch (class in arborize.schematic) CableParameter (class in arborize.parameter) CableProperties (class in arborize) (class in arborize.definitions) CablePropertiesDict (class in arborize.definitions) cables (arborize.Schematic attribute) CableType (class in arborize) (class in arborize.definitions) CableTypeDict (class in arborize.definitions) children (arborize.schematic.Branch attribute) (arborize.schematic.CableBranch attribute) (arborize.schematic.UnitBranch attribute) cm (arborize.CableProperties attribute) (arborize.definitions.CableProperties attribute) (arborize.definitions.CablePropertiesDict attribute) ConstructionError copy() (arborize.CableType method) (arborize.definitions.CableType method) (arborize.definitions.Definition method) (arborize.definitions.Mechanism method) (arborize.definitions.Synapse method) (arborize.Mechanism method) create_empty() (arborize.Schematic method) (arborize.schematic.Schematic method) create_location() (arborize.Schematic method) (arborize.schematic.Schematic method) create_name() (arborize.Schematic method) (arborize.schematic.Schematic method) D default() (arborize.CableType class method) (arborize.definitions.CableType class method) default_ions_dict (class in arborize.definitions) define_constraints() (in module arborize) define_model() (in module arborize) (in module arborize.definitions) definition (arborize.Schematic property) (arborize.schematic.Schematic property) (arborize.schematic.UnitBranch attribute) Definition (class in arborize.definitions) E ExpandedSynapseDict (class in arborize.definitions) ext_con (arborize.definitions.Ion attribute) (arborize.definitions.IonDict attribute) (arborize.Ion attribute) F file_schematic() (in module arborize) freeze() (arborize.Schematic method) (arborize.schematic.Schematic method) FrozenError G get_cable_types() (arborize.definitions.Definition method) (arborize.Schematic method) (arborize.schematic.Schematic method) get_compound_cable_types() (arborize.Schematic method) (arborize.schematic.Schematic method) get_synapse_types() (arborize.definitions.Definition method) (arborize.Schematic method) (arborize.schematic.Schematic method) I int_con (arborize.definitions.Ion attribute) (arborize.definitions.IonDict attribute) (arborize.Ion attribute) Ion (class in arborize) (class in arborize.definitions) ion_class (arborize.definitions.Definition property) (arborize.definitions.ModelDefinition attribute) (arborize.ModelDefinition attribute) IonDict (class in arborize.definitions) IonParameter (class in arborize.parameter) ions (arborize.CableType attribute) (arborize.definitions.CableType attribute) (arborize.definitions.CableTypeDict attribute) is_mech_id() (in module arborize) (in module arborize.definitions) L labels (arborize.schematic.UnitBranch attribute) M mech_id (arborize.definitions.Synapse attribute) mechanism (arborize.definitions.ExpandedSynapseDict attribute) Mechanism (class in arborize) (class in arborize.definitions) mechanism_class (arborize.definitions.Definition property) (arborize.definitions.ModelDefinition attribute) (arborize.ModelDefinition attribute) mechanisms (arborize.definitions.CableTypeDict attribute) mechdict (class in arborize.definitions) MechParameter (class in arborize.parameter) mechs (arborize.CableType attribute) (arborize.definitions.CableType attribute) merge() (arborize.CableType method) (arborize.definitions.CableType method) (arborize.definitions.Mechanism method) (arborize.Mechanism method) ModelDefinition (class in arborize) (class in arborize.definitions) ModelDefinitionDict (class in arborize.definitions) ModelDefinitionError ModelError module arborize arborize.builders arborize.definitions arborize.exceptions arborize.parameter arborize.schematic arborize.schematics arborize.synapse N name (arborize.Schematic property) (arborize.schematic.Schematic property) neuron_build() (in module arborize) P Parameter (class in arborize.parameter) parameters (arborize.definitions.ExpandedSynapseDict attribute) parent (arborize.schematic.Branch attribute) (arborize.schematic.CableBranch attribute) (arborize.schematic.UnitBranch attribute) Point (class in arborize.schematic) points (arborize.schematic.Branch attribute) presynaptic() (arborize.synapse.Synapse method) R Ra (arborize.CableProperties attribute) (arborize.definitions.CableProperties attribute) (arborize.definitions.CablePropertiesDict attribute) record() (arborize.synapse.Synapse method) rev_pot (arborize.definitions.Ion attribute) (arborize.definitions.IonDict attribute) (arborize.Ion attribute) roots (arborize.Schematic attribute) S Schematic (class in arborize) (class in arborize.schematic) SchematicError set() (arborize.CableType method) (arborize.definitions.CableType method) set_cable_params() (arborize.parameter.CableParameter method) set_param() (arborize.Schematic method) (arborize.schematic.Schematic method) stimulate() (arborize.synapse.Synapse method) Synapse (class in arborize.definitions) (class in arborize.synapse) synapse_class (arborize.definitions.Definition property) (arborize.definitions.ModelDefinition attribute) (arborize.ModelDefinition attribute) synapse_types (arborize.definitions.ModelDefinitionDict attribute) synapses (arborize.CableType attribute) (arborize.definitions.CableType attribute) (arborize.definitions.CableTypeDict attribute) T throw_frozen() (in module arborize.schematic) to_mech_id() (in module arborize.definitions) TransmitterError U UnitBranch (class in arborize.schematic) UnknownLocationError UnknownSynapseError